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Research Article

24 Hours in the Life of HIV-1 in a T Cell Line

  • Pejman Mohammadi,

    Affiliations: Department of Biosystems Science and Engineering, ETH Zurich, Basel, Switzerland, SIB Swiss Institute of Bioinformatics, Basel and Lausanne, Switzerland

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  • Sébastien Desfarges,

    Affiliation: Institute of Microbiology, Centre Hospitalier Universitaire Vaudois, Lausanne, Switzerland

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  • István Bartha,

    Affiliation: Institute of Microbiology, Centre Hospitalier Universitaire Vaudois, Lausanne, Switzerland

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  • Beda Joos,

    Affiliation: Division of Infectious Diseases and Hospital Epidemiology, University Hospital Zurich, University of Zurich, Zurich, Switzerland

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  • Nadine Zangger,

    Affiliations: SIB Swiss Institute of Bioinformatics, Basel and Lausanne, Switzerland, Institute of Microbiology, Centre Hospitalier Universitaire Vaudois, Lausanne, Switzerland

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  • Miguel Muñoz,

    Affiliation: Institute of Microbiology, Centre Hospitalier Universitaire Vaudois, Lausanne, Switzerland

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  • Huldrych F. Günthard,

    Affiliation: Division of Infectious Diseases and Hospital Epidemiology, University Hospital Zurich, University of Zurich, Zurich, Switzerland

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  • Niko Beerenwinkel mail,

    niko.beerenwinkel@bsse.ethz.ch (NB); amalio.telenti@chuv.ch (AT); angela.ciuffi@chuv.ch (AC)

    Affiliations: Department of Biosystems Science and Engineering, ETH Zurich, Basel, Switzerland, SIB Swiss Institute of Bioinformatics, Basel and Lausanne, Switzerland

    X
  • Amalio Telenti mail,

    niko.beerenwinkel@bsse.ethz.ch (NB); amalio.telenti@chuv.ch (AT); angela.ciuffi@chuv.ch (AC)

    Affiliations: Institute of Microbiology, Centre Hospitalier Universitaire Vaudois, Lausanne, Switzerland, University of Lausanne, Lausanne, Switzerland

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  • Angela Ciuffi mail

    niko.beerenwinkel@bsse.ethz.ch (NB); amalio.telenti@chuv.ch (AT); angela.ciuffi@chuv.ch (AC)

    Affiliations: Institute of Microbiology, Centre Hospitalier Universitaire Vaudois, Lausanne, Switzerland, University of Lausanne, Lausanne, Switzerland

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  • Published: January 31, 2013
  • DOI: 10.1371/journal.ppat.1003161

About the Authors

Pejman Mohammadi, Niko Beerenwinkel
Department of Biosystems Science and Engineering, ETH Zurich, Basel, Switzerland
Pejman Mohammadi, Nadine Zangger, Niko Beerenwinkel
SIB Swiss Institute of Bioinformatics, Basel and Lausanne, Switzerland
Sébastien Desfarges, István Bartha, Nadine Zangger, Miguel Muñoz, Amalio Telenti, Angela Ciuffi
Institute of Microbiology, Centre Hospitalier Universitaire Vaudois, Lausanne, Switzerland
Beda Joos, Huldrych F. Günthard
Division of Infectious Diseases and Hospital Epidemiology, University Hospital Zurich, University of Zurich, Zurich, Switzerland
Amalio Telenti, Angela Ciuffi
University of Lausanne, Lausanne, Switzerland

Corresponding Authors

Competing Interests

The authors have declared that no competing interests exist.

Author Contributions

Conceived and designed the experiments: AC PM NB AT. Performed the experiments: SD BJ MM HFG AC. Analyzed the data: PM NZ IB AC. Contributed reagents/materials/analysis tools: PM SD BJ NZ IB MM HFG NB AT AC. Wrote the paper: PM NB AT AC. Developed the web service: IB.