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Research Article

Deciphering the Cryptic Genome: Genome-wide Analyses of the Rice Pathogen Fusarium fujikuroi Reveal Complex Regulation of Secondary Metabolism and Novel Metabolites

  • Philipp Wiemann equal contributor,

    equal contributor Contributed equally to this work with: Philipp Wiemann, Christian M. K. Sieber, Katharina W. von Bargen

    Affiliation: Institut für Biologie und Biotechnologie der Pflanzen, Molecular Biology and Biotechnology of Fungi, Westfälische Wilhelms-Universität Münster, Münster, Germany

    Current address: Department of Medical Microbiology and Immunology, University of Wisconsin-Madison, Madison, Wisconsin, United States of America.

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  • Christian M. K. Sieber equal contributor,

    equal contributor Contributed equally to this work with: Philipp Wiemann, Christian M. K. Sieber, Katharina W. von Bargen

    Affiliation: Institute of Bioinformatics and Systems Biology, Helmholtz Zentrum München, German Research Center for Environmental Health (GmbH), Neuherberg, Germany

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  • Katharina W. von Bargen equal contributor,

    equal contributor Contributed equally to this work with: Philipp Wiemann, Christian M. K. Sieber, Katharina W. von Bargen

    Affiliation: Institute for Food Chemistry, Westfälische Wilhelms-Universität Münster, Corrensstraße 45, Münster, Germany

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  • Lena Studt,

    Affiliations: Institut für Biologie und Biotechnologie der Pflanzen, Molecular Biology and Biotechnology of Fungi, Westfälische Wilhelms-Universität Münster, Münster, Germany, Institute for Food Chemistry, Westfälische Wilhelms-Universität Münster, Corrensstraße 45, Münster, Germany

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  • Eva-Maria Niehaus,

    Affiliation: Institut für Biologie und Biotechnologie der Pflanzen, Molecular Biology and Biotechnology of Fungi, Westfälische Wilhelms-Universität Münster, Münster, Germany

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  • Jose J. Espino,

    Affiliation: Institut für Biologie und Biotechnologie der Pflanzen, Molecular Biology and Biotechnology of Fungi, Westfälische Wilhelms-Universität Münster, Münster, Germany

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  • Kathleen Huß,

    Affiliation: Institut für Biologie und Biotechnologie der Pflanzen, Molecular Biology and Biotechnology of Fungi, Westfälische Wilhelms-Universität Münster, Münster, Germany

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  • Caroline B. Michielse,

    Affiliation: Institut für Biologie und Biotechnologie der Pflanzen, Molecular Biology and Biotechnology of Fungi, Westfälische Wilhelms-Universität Münster, Münster, Germany

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  • Sabine Albermann,

    Affiliation: Institut für Biologie und Biotechnologie der Pflanzen, Molecular Biology and Biotechnology of Fungi, Westfälische Wilhelms-Universität Münster, Münster, Germany

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  • Dominik Wagner,

    Affiliation: Institut für Biologie und Biotechnologie der Pflanzen, Molecular Biology and Biotechnology of Fungi, Westfälische Wilhelms-Universität Münster, Münster, Germany

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  • Sonja V. Bergner,

    Affiliation: Institut für Biologie und Biotechnologie der Pflanzen, Plant Biochemistry and Biotechnology, Westfälische Wilhelms-Universität Münster, Münster, Germany

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  • Lanelle R. Connolly,

    Affiliation: Department of Biochemistry and Biophysics, Center for Genome Research and Biocomputing, Oregon State University, Corvallis, Oregon, United States of America

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  • Andreas Fischer,

    Affiliation: Institut of Genetics/Developmental Genetics, Martin-Luther-Universität Halle-Wittenberg, Halle, Germany

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  • Gunter Reuter,

    Affiliation: Institut of Genetics/Developmental Genetics, Martin-Luther-Universität Halle-Wittenberg, Halle, Germany

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  • Karin Kleigrewe,

    Affiliation: Institute for Food Chemistry, Westfälische Wilhelms-Universität Münster, Corrensstraße 45, Münster, Germany

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  • Till Bald,

    Affiliation: Institut für Biologie und Biotechnologie der Pflanzen, Plant Biochemistry and Biotechnology, Westfälische Wilhelms-Universität Münster, Münster, Germany

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  • Brenda D. Wingfield,

    Affiliation: Department of Genetics, University of Pretoria, Hatfield, Pretoria, South Africa

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  • Ron Ophir,

    Affiliation: Institute of Plant Sciences, Genomics, Agricultural Research Organization (ARO), The Volcani Center, Bet-Dagan, Israel

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  • Stanley Freeman,

    Affiliation: Department of Plant Pathology, Agricultural Research Organization (ARO), The Volcani Center, Bet-Dagan, Israel

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  • Michael Hippler,

    Affiliation: Institut für Biologie und Biotechnologie der Pflanzen, Plant Biochemistry and Biotechnology, Westfälische Wilhelms-Universität Münster, Münster, Germany

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  • Kristina M. Smith,

    Affiliation: Department of Biochemistry and Biophysics, Center for Genome Research and Biocomputing, Oregon State University, Corvallis, Oregon, United States of America

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  • Daren W. Brown,

    Affiliation: National Center for Agricultural Utilization Research, United States Department of Agriculture, Peoria, Illinois, United States of America

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  • Robert H. Proctor,

    Affiliation: National Center for Agricultural Utilization Research, United States Department of Agriculture, Peoria, Illinois, United States of America

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  • Martin Münsterkötter,

    Affiliation: Institute of Bioinformatics and Systems Biology, Helmholtz Zentrum München, German Research Center for Environmental Health (GmbH), Neuherberg, Germany

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  • Michael Freitag,

    Affiliation: Department of Biochemistry and Biophysics, Center for Genome Research and Biocomputing, Oregon State University, Corvallis, Oregon, United States of America

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  • Hans-Ulrich Humpf mail,

    humpf@uni-muenster.de (HGH); u.gueldener@helmholtz-muenchen.de (UG); tudzynsb@uni-muenster.de (BT)

    Affiliation: Institute for Food Chemistry, Westfälische Wilhelms-Universität Münster, Corrensstraße 45, Münster, Germany

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  • Ulrich Güldener mail,

    humpf@uni-muenster.de (HGH); u.gueldener@helmholtz-muenchen.de (UG); tudzynsb@uni-muenster.de (BT)

    Affiliation: Institute of Bioinformatics and Systems Biology, Helmholtz Zentrum München, German Research Center for Environmental Health (GmbH), Neuherberg, Germany

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  • Bettina Tudzynski mail

    humpf@uni-muenster.de (HGH); u.gueldener@helmholtz-muenchen.de (UG); tudzynsb@uni-muenster.de (BT)

    Affiliation: Institut für Biologie und Biotechnologie der Pflanzen, Molecular Biology and Biotechnology of Fungi, Westfälische Wilhelms-Universität Münster, Münster, Germany

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  • Published: June 27, 2013
  • DOI: 10.1371/journal.ppat.1003475

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